Please let me know if you have trouble running the codes below. For more codes, please visit code.sonography.ai

 

Code 4. OverWind (tOtal Variation Regularization and WINDow-based, needs 2 input ultrasound images)

OverWind (tOtal Variation Regularization and WINDow-based) is available for download from here (zip file with RF data). If you use the code, please cite the following papers:

M. Mirzaei*, A. Asif, H. Rivaz, Combining Total Variation Regularization with Window-based Time Delay Estimation in Ultrasound Elastography, IEEE Trans. Medical Imaging (TMI), 2019.
pdf, supplementary material.

Rivaz, H., Boctor, E., Choti, M., Hager, G., Real-Time Regularized Ultrasound Elastography, IEEE Trans. Medical Imaging, 2011, pdf.

Code 3. GUEST (Global Ultrasound Elastography in Spatial and Temporal Domains, needs 3 input ultrasound images)

GUEST (Global Ultrasound Elastography in Spatial and Temporal Domains) is available for download from here (zip file with RF data). If you use the code, please cite the following papers:

M Ashikuzzaman*, C. Gauthier, H. Rivaz, Global Ultrasound Elastography in Spatial and Temporal Domains, IEEE Trans. UFFC, 2019,
IEEE Xplore, pdf, supplementary material.

Rivaz, H., Boctor, E., Choti, M., Hager, G., Real-Time Regularized Ultrasound Elastography, IEEE Trans. Medical Imaging, 2011, pdf.

Code 2. GLUE (GLobal Ultrasound Elastography, needs 2 input ultrasound images)

GLUE (GLobal Ultrasound Elastography) is available for download from here (zip file with RF data). If you use the code, please cite the following papers:

H. Hashemi*, H. Rivaz, Global Time-Delay Estimation in Ultrasound Elastography, IEEE Trans. Ultrasonics Ferroelectrics Frequency Control (TUFFC), Oct. 2017, vol 64, pp 1625-1636
IEEE Xplore, pdf.

Rivaz, H., Boctor, E., Choti, M., Hager, G., Real-Time Regularized Ultrasound Elastography, IEEE Trans. Medical Imaging, April 2011, vol. 30 pp 928-945 pdf.

Code 1. AM2D (aka DPAM, needs 2 input ultrasound images)

Ultrasound Elastography (Matlab MEX) Code, and ultrasound Radio-Frequency (RF) data of patients with liver cancer, as well as RF data from liver ablation therapy

The AM2D code can be downloaded from here (zip files with RF data). The zip file contains the compiled MEX functions, Matlab files and sample ultrasound RF data. After unzipping the file, read the readMe.txt to find out how to run the code. The algorithm is based on the following two papers. If you use the code or the radiofrequency RF data (which contains data from some patient trials of liver ablation), please cite these papers.

1. Rivaz, H., Boctor, E., Choti, M., Hager, G., Real-Time Regularized Ultrasound Elastography, IEEE Trans. Medical Imaging, April 2011, vol. 30 pp 928-945 pdf.

2. Rivaz, H., Boctor, E., Foroughi, P., Zellars, R., Fichtinger, G., Hager, G., Ultrasound Elastography: a Dynamic Programming Approach, IEEE Trans. Medical Imaging Oct. 2008, vol. 27 pp 1373-1377 pdf.

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